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#include "block_histogram.h"
#include <library/cpp/histogram/adaptive/protos/histo.pb.h>
#include <util/generic/algorithm.h>
#include <util/generic/yexception.h>
#include <util/generic/intrlist.h>
#include <util/generic/ptr.h>
#include <util/generic/queue.h>
#include <util/generic/ymath.h>
#include <util/string/printf.h>
namespace {
struct TEmpty {
};
class TSmartHeap {
private:
TVector<ui32> A;
TVector<ui32> Pos;
const TVector<double>& Weights;
public:
TSmartHeap(const TVector<double>& weights)
: A(weights.size())
, Pos(weights.size())
, Weights(weights)
{
for (ui32 i = 0; i < weights.size(); ++i) {
A[i] = i;
Pos[i] = i;
}
for (ui32 i = weights.size() / 2; i > 0; --i) {
Down(i - 1);
}
}
ui32 IdOfMin() {
return A[0];
}
void Pop() {
A[0] = A.back();
Pos[A[0]] = 0;
A.pop_back();
Down(0);
}
void DownElement(ui32 id) {
Down(Pos[id]);
}
private:
void SwapPositions(ui32 x, ui32 y) {
std::swap(A[x], A[y]);
Pos[A[x]] = x;
Pos[A[y]] = y;
}
void Down(ui32 pos) {
while (1) {
ui32 left = pos * 2 + 1;
ui32 right = pos * 2 + 2;
ui32 min = pos;
if (left < A.size() && Weights[A[min]] > Weights[A[left]])
min = left;
if (right < A.size() && Weights[A[min]] > Weights[A[right]])
min = right;
if (pos == min)
break;
SwapPositions(min, pos);
pos = min;
}
}
};
}
namespace NKiwiAggr {
///////////////////
// TBlockHistogram
///////////////////
TBlockHistogram::TBlockHistogram(EHistogramType type, TQualityFunction calcQuality,
size_t intervals, ui64 id, size_t shrinkSize)
: Type(type)
, CalcQuality(calcQuality)
, Intervals(intervals)
, ShrinkSize(shrinkSize)
, PrevSize(0)
, Id(id)
, Sum(0)
, MinValue(0)
, MaxValue(0)
{
CorrectShrinkSize();
}
void TBlockHistogram::Clear() {
PrevSize = 0;
Sum = 0.0;
MinValue = 0.0;
MaxValue = 0.0;
Bins.clear();
}
void TBlockHistogram::Add(const THistoRec& rec) {
if (!rec.HasId() || rec.GetId() == Id) {
Add(rec.GetValue(), rec.GetWeight());
}
}
void TBlockHistogram::Add(double value, double weight) {
if (!IsValidFloat(value) || !IsValidFloat(weight)) {
ythrow yexception() << Sprintf("Histogram id %lu: bad value %f weight %f", Id, value, weight);
}
if (weight <= 0.0) {
return; // all zero-weighted values should be skipped because they don't affect the distribution, negative weights are forbidden
}
if (Bins.empty()) {
MinValue = value;
MaxValue = value;
} else {
MinValue = Min(MinValue, value);
MaxValue = Max(MaxValue, value);
}
Sum += weight;
if (Bins.size() > ShrinkSize) {
SortAndShrink(Intervals * SHRINK_MULTIPLIER);
}
Bins.push_back(TWeightedValue(value, weight));
}
void TBlockHistogram::Merge(const THistogram& histo, double multiplier) {
if (!IsValidFloat(histo.GetMinValue()) || !IsValidFloat(histo.GetMaxValue())) {
fprintf(stderr, "Merging in histogram id %lu: skip bad histo with minvalue %f maxvalue %f\n", Id, histo.GetMinValue(), histo.GetMaxValue());
return;
}
if (histo.FreqSize() == 0) {
return; // skip empty histos
}
if (histo.GetType() == HT_ADAPTIVE_DISTANCE_HISTOGRAM ||
histo.GetType() == HT_ADAPTIVE_WEIGHT_HISTOGRAM ||
histo.GetType() == HT_ADAPTIVE_WARD_HISTOGRAM ||
histo.GetType() == HT_ADAPTIVE_HISTOGRAM)
{
Y_VERIFY(histo.FreqSize() == histo.PositionSize(), "Corrupted histo");
for (size_t j = 0; j < histo.FreqSize(); ++j) {
double value = histo.GetPosition(j);
double weight = histo.GetFreq(j);
if (!IsValidFloat(value) || !IsValidFloat(weight)) {
fprintf(stderr, "Merging in histogram id %lu: skip bad value %f weight %f\n", Id, value, weight);
continue;
}
Add(value, weight * multiplier);
}
MinValue = Min(MinValue, histo.GetMinValue());
MaxValue = Max(MaxValue, histo.GetMaxValue());
} else if (histo.GetType() == HT_FIXED_BIN_HISTOGRAM) {
double pos = histo.GetMinValue() + histo.GetBinRange() / 2.0;
for (size_t j = 0; j < histo.FreqSize(); ++j) {
double weight = histo.GetFreq(j);
if (!IsValidFloat(pos) || !IsValidFloat(weight)) {
fprintf(stderr, "Merging in histogram id %lu: skip bad value %f weight %f\n", Id, pos, weight);
pos += histo.GetBinRange();
continue;
}
Add(pos, weight * multiplier);
pos += histo.GetBinRange();
}
MinValue = Min(MinValue, histo.GetMinValue());
MaxValue = Max(MaxValue, histo.GetMaxValue());
} else {
ythrow yexception() << "Unknown THistogram type";
}
}
void TBlockHistogram::Merge(const TVector<THistogram>& histogramsToMerge) {
for (size_t i = 0; i < histogramsToMerge.size(); ++i) {
Merge(histogramsToMerge[i], 1.0);
}
}
void TBlockHistogram::Merge(TVector<IHistogramPtr> histogramsToMerge) {
Y_UNUSED(histogramsToMerge);
ythrow yexception() << "IHistogram::Merge(TVector<IHistogramPtr>) is not defined for TBlockHistogram";
}
void TBlockHistogram::Multiply(double factor) {
if (!IsValidFloat(factor) || factor <= 0) {
ythrow yexception() << "Not valid factor in IHistogram::Multiply(): " << factor;
}
Sum *= factor;
for (TVector<TWeightedValue>::iterator it = Bins.begin(); it != Bins.end(); ++it) {
it->second *= factor;
}
}
void TBlockHistogram::FromProto(const THistogram& histo) {
Y_VERIFY(histo.HasType(), "Attempt to parse TBlockHistogram from THistogram protobuf with no Type field set");
;
switch (histo.GetType()) { // check that histogram type is correct
case HT_ADAPTIVE_DISTANCE_HISTOGRAM:
case HT_ADAPTIVE_WEIGHT_HISTOGRAM:
case HT_ADAPTIVE_WARD_HISTOGRAM:
case HT_ADAPTIVE_HISTOGRAM:
break; // ok
default: // not ok
ythrow yexception() << "Attempt to parse TBlockHistogram from THistogram protobuf record of type = " << (ui32)histo.GetType();
}
if (histo.FreqSize() != histo.PositionSize()) {
ythrow yexception() << "Attempt to parse TBlockHistogram from THistogram protobuf record where FreqSize != PositionSize. FreqSize == " << (ui32)histo.FreqSize() << ", PositionSize == " << (ui32)histo.PositionSize();
}
Id = histo.GetId();
Sum = 0;
Intervals = Max(Intervals, histo.FreqSize());
CorrectShrinkSize();
Bins.resize(histo.FreqSize());
PrevSize = Bins.size();
for (size_t i = 0; i < histo.FreqSize(); ++i) {
double value = histo.GetPosition(i);
double weight = histo.GetFreq(i);
if (!IsValidFloat(value) || !IsValidFloat(weight)) {
fprintf(stderr, "FromProto in histogram id %lu: skip bad value %f weight %f\n", Id, value, weight);
continue;
}
Bins[i].first = value;
Bins[i].second = weight;
Sum += Bins[i].second;
}
if (!IsValidFloat(histo.GetMinValue()) || !IsValidFloat(histo.GetMaxValue())) {
ythrow yexception() << Sprintf("FromProto in histogram id %lu: skip bad histo with minvalue %f maxvalue %f", Id, histo.GetMinValue(), histo.GetMaxValue());
}
MinValue = histo.GetMinValue();
MaxValue = histo.GetMaxValue();
}
void TBlockHistogram::ToProto(THistogram& histo) {
histo.Clear();
histo.SetType(Type);
histo.SetId(Id);
if (Empty()) {
return;
}
SortAndShrink(Intervals, true);
histo.SetMinValue(MinValue);
histo.SetMaxValue(MaxValue);
for (TVector<TWeightedValue>::const_iterator it = Bins.begin(); it != Bins.end(); ++it) {
histo.AddFreq(it->second);
histo.AddPosition(it->first);
}
}
void TBlockHistogram::SetId(ui64 id) {
Id = id;
}
ui64 TBlockHistogram::GetId() {
return Id;
}
bool TBlockHistogram::Empty() {
return Bins.empty();
}
double TBlockHistogram::GetMinValue() {
return MinValue;
}
double TBlockHistogram::GetMaxValue() {
return MaxValue;
}
double TBlockHistogram::GetSum() {
return Sum;
}
void TBlockHistogram::SortAndShrink(size_t intervals, bool final) {
Y_VERIFY(intervals > 0);
if (Bins.size() <= intervals) {
return;
}
if (Bins.size() >= Intervals * GREEDY_SHRINK_MULTIPLIER) {
SortBins();
UniquifyBins();
FastGreedyShrink(intervals);
if (final) {
SlowShrink(intervals);
}
} else {
SortBins();
UniquifyBins();
SlowShrink(intervals);
}
}
void TBlockHistogram::SortBins() {
Sort(Bins.begin() + PrevSize, Bins.end());
if (PrevSize != 0) {
TVector<TWeightedValue> temp(Bins.begin(), Bins.begin() + PrevSize);
std::merge(temp.begin(), temp.end(), Bins.begin() + PrevSize, Bins.end(), Bins.begin());
}
}
void TBlockHistogram::UniquifyBins() {
if (Bins.empty())
return;
auto it1 = Bins.begin();
auto it2 = Bins.begin();
while (++it2 != Bins.end()) {
if (it1->first == it2->first) {
it1->second += it2->second;
} else {
*(++it1) = *it2;
}
}
Bins.erase(++it1, Bins.end());
}
void TBlockHistogram::CorrectShrinkSize() {
ShrinkSize = Max(ShrinkSize, Intervals * (SHRINK_MULTIPLIER + GREEDY_SHRINK_MULTIPLIER));
}
void TBlockHistogram::SlowShrink(size_t intervals) {
{
size_t pos = 0;
for (size_t i = 1; i < Bins.size(); ++i)
if (Bins[i].first - Bins[pos].first < 1e-9) {
Bins[pos].second += Bins[i].second;
} else {
++pos;
Bins[pos] = Bins[i];
}
Bins.resize(pos + 1);
PrevSize = pos + 1;
}
if (Bins.size() <= intervals) {
return;
}
typedef TIntrusiveListItem<TEmpty> TListItem;
ui32 n = Bins.size() - 1;
const ui32 end = (ui32)Bins.size();
TArrayHolder<TListItem> listElementsHolder(new TListItem[end + 1]);
TListItem* const bins = listElementsHolder.Get();
for (ui32 i = 1; i <= end; ++i) {
bins[i].LinkAfter(&bins[i - 1]);
}
TVector<double> pairWeights(n);
for (ui32 i = 0; i < n; ++i) {
pairWeights[i] = CalcQuality(Bins[i], Bins[i + 1]).first;
}
TSmartHeap heap(pairWeights);
while (n + 1 > intervals) {
ui32 b = heap.IdOfMin();
heap.Pop();
ui32 a = (ui32)(bins[b].Prev() - bins);
ui32 c = (ui32)(bins[b].Next() - bins);
ui32 d = (ui32)(bins[b].Next()->Next() - bins);
Y_VERIFY(Bins[c].second != -1);
double mass = Bins[b].second + Bins[c].second;
Bins[c].first = (Bins[b].first * Bins[b].second + Bins[c].first * Bins[c].second) / mass;
Bins[c].second = mass;
bins[b].Unlink();
Bins[b].second = -1;
if (a != end) {
pairWeights[a] = CalcQuality(Bins[a], Bins[c]).first;
heap.DownElement(a);
}
if (d != end && c + 1 != Bins.size()) {
pairWeights[c] = CalcQuality(Bins[c], Bins[d]).first;
heap.DownElement(c);
}
--n;
}
size_t pos = 0;
for (TListItem* it = bins[end].Next(); it != &bins[end]; it = it->Next()) {
Bins[pos++] = Bins[it - bins];
}
Bins.resize(pos);
PrevSize = pos;
Y_VERIFY(pos == intervals);
}
double TBlockHistogram::GetSumInRange(double leftBound, double rightBound) {
Y_UNUSED(leftBound);
Y_UNUSED(rightBound);
ythrow yexception() << "Method is not implemented for TBlockHistogram";
return 0;
}
double TBlockHistogram::GetSumAboveBound(double bound) {
Y_UNUSED(bound);
ythrow yexception() << "Method is not implemented for TBlockHistogram";
return 0;
}
double TBlockHistogram::GetSumBelowBound(double bound) {
Y_UNUSED(bound);
ythrow yexception() << "Method is not implemented for TBlockHistogram";
return 0;
}
double TBlockHistogram::CalcUpperBound(double sum) {
Y_UNUSED(sum);
ythrow yexception() << "Method is not implemented for TBlockHistogram";
return 0;
}
double TBlockHistogram::CalcLowerBound(double sum) {
Y_UNUSED(sum);
ythrow yexception() << "Method is not implemented for TBlockHistogram";
return 0;
}
double TBlockHistogram::CalcUpperBoundSafe(double sum) {
Y_UNUSED(sum);
ythrow yexception() << "Method is not implemented for TBlockHistogram";
return 0;
}
double TBlockHistogram::CalcLowerBoundSafe(double sum) {
Y_UNUSED(sum);
ythrow yexception() << "Method is not implemented for TBlockHistogram";
return 0;
}
/////////////////////////
// TBlockWeightHistogram
/////////////////////////
TBlockWeightHistogram::TBlockWeightHistogram(size_t intervals, ui64 id, size_t shrinkSize)
: TBlockHistogram(HT_ADAPTIVE_WEIGHT_HISTOGRAM, CalcWeightQuality, intervals, id, shrinkSize)
{
}
void TBlockWeightHistogram::FastGreedyShrink(size_t intervals) {
if (Bins.size() <= intervals)
return;
double slab = Sum / intervals;
size_t i = 0;
size_t pos = 0;
while (i < Bins.size()) {
double curW = Bins[i].second;
double curMul = Bins[i].first * Bins[i].second;
++i;
while (i < Bins.size() && curW + Bins[i].second <= slab && pos + Bins.size() - i >= intervals) {
curW += Bins[i].second;
curMul += Bins[i].first * Bins[i].second;
++i;
}
Bins[pos++] = TWeightedValue(curMul / curW, curW);
}
Bins.resize(pos);
PrevSize = pos;
}
///////////////////////
// TBlockWardHistogram
///////////////////////
TBlockWardHistogram::TBlockWardHistogram(size_t intervals, ui64 id, size_t shrinkSize)
: TBlockHistogram(HT_ADAPTIVE_WARD_HISTOGRAM, CalcWardQuality, intervals, id, shrinkSize)
{
}
bool TBlockWardHistogram::CalcSplitInfo(
const TCumulatives::const_iterator beg,
const TCumulatives::const_iterator end, // (!) points to the final element
TSplitInfo& splitInfo // out
) {
if (end - beg < 2) {
return false;
}
TCumulatives::const_iterator mid = LowerBound(beg, end + 1, TCumulative{(beg->first + end->first) / 2, 0.});
if (mid == beg) {
mid++;
} else if (mid == end) {
mid--;
}
// derived from Ward's minimum variance criterion
double profit = 0.0;
profit += (mid->second - beg->second) * (mid->second - beg->second) / (mid->first - beg->first);
profit += (end->second - mid->second) * (end->second - mid->second) / (end->first - mid->first);
profit -= (end->second - beg->second) * (end->second - beg->second) / (end->first - beg->first);
splitInfo = {profit, beg, mid, end};
return true;
}
void TBlockWardHistogram::FastGreedyShrink(size_t intervals) {
Y_VERIFY(intervals > 0);
if (Bins.size() <= intervals) {
return;
}
// fill cumulative sums
// sum at index i equals to the sum of all values before i
// sum at index i+1 equals to the sum of all values before i with the value at i added
TCumulatives cumulatives;
cumulatives.reserve(Bins.size() + 1);
TCumulative cumulative = {0., 0.};
cumulatives.push_back(cumulative);
for (size_t i = 0; i < Bins.size(); i++) {
cumulative.first += Bins[i].second;
cumulative.second += Bins[i].second * Bins[i].first;
cumulatives.push_back(cumulative);
}
TVector<TCumulatives::const_iterator> splits;
splits.reserve(intervals + 1);
splits.push_back(cumulatives.begin());
splits.push_back(cumulatives.end() - 1);
TPriorityQueue<TSplitInfo> candidates;
// explicitly add first split
TSplitInfo newSplitInfo;
if (CalcSplitInfo(cumulatives.begin(), cumulatives.end() - 1, newSplitInfo)) {
candidates.push(newSplitInfo);
}
// recursively split until done
for (size_t split = 0; split < intervals - 1 && !candidates.empty(); split++) {
TSplitInfo curSplitInfo = candidates.top();
candidates.pop();
splits.push_back(curSplitInfo.mid);
if (CalcSplitInfo(curSplitInfo.beg, curSplitInfo.mid, newSplitInfo)) {
candidates.push(newSplitInfo);
}
if (CalcSplitInfo(curSplitInfo.mid, curSplitInfo.end, newSplitInfo)) {
candidates.push(newSplitInfo);
}
}
// calclate new bin centers and weights
Sort(splits.begin(), splits.end());
Bins.clear();
for (auto it = splits.begin(); it + 1 != splits.end(); ++it) {
auto splitBeg = *it;
auto splitEnd = *(it + 1);
double cnt = (splitEnd->first - splitBeg->first);
double mu = (splitEnd->second - splitBeg->second) / cnt;
Bins.push_back(TWeightedValue(mu, cnt));
}
}
}
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