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"""
A Cython plugin for coverage.py
Requires the coverage package at least in version 4.0 (which added the plugin API).
"""
from __future__ import absolute_import
import re
import os.path
import sys
from collections import defaultdict
from coverage.plugin import CoveragePlugin, FileTracer, FileReporter # requires coverage.py 4.0+
from coverage.files import canonical_filename
from .Utils import find_root_package_dir, is_package_dir, open_source_file
from . import __version__
C_FILE_EXTENSIONS = ['.c', '.cpp', '.cc', '.cxx']
MODULE_FILE_EXTENSIONS = set(['.py', '.pyx', '.pxd'] + C_FILE_EXTENSIONS)
def _find_c_source(base_path):
file_exists = os.path.exists
for ext in C_FILE_EXTENSIONS:
file_name = base_path + ext
if file_exists(file_name):
return file_name
return None
def _find_dep_file_path(main_file, file_path, relative_path_search=False):
abs_path = os.path.abspath(file_path)
if not os.path.exists(abs_path) and (file_path.endswith('.pxi') or
relative_path_search):
# files are looked up relative to the main source file
rel_file_path = os.path.join(os.path.dirname(main_file), file_path)
if os.path.exists(rel_file_path):
abs_path = os.path.abspath(rel_file_path)
# search sys.path for external locations if a valid file hasn't been found
if not os.path.exists(abs_path):
for sys_path in sys.path:
test_path = os.path.realpath(os.path.join(sys_path, file_path))
if os.path.exists(test_path):
return canonical_filename(test_path)
return canonical_filename(abs_path)
class Plugin(CoveragePlugin):
# map from traced file paths to absolute file paths
_file_path_map = None
# map from traced file paths to corresponding C files
_c_files_map = None
# map from parsed C files to their content
_parsed_c_files = None
def sys_info(self):
return [('Cython version', __version__)]
def file_tracer(self, filename):
"""
Try to find a C source file for a file path found by the tracer.
"""
# TODO We need to pxd-files to the include map. For more info see pybuild.py
# Currently skip such files, because they are not supported in Arcadia pybuild with coverage.
if os.path.splitext(filename)[-1] not in ('.pyx', '.pxi'):
return None
if filename.startswith('<') or filename.startswith('memory:'):
return None
c_file = py_file = None
filename = canonical_filename(filename)
if self._c_files_map and filename in self._c_files_map:
c_file = self._c_files_map[filename][0]
if c_file is None:
c_file, py_file = self._find_source_files(filename)
if not c_file:
return None # unknown file
# parse all source file paths and lines from C file
# to learn about all relevant source files right away (pyx/pxi/pxd)
# FIXME: this might already be too late if the first executed line
# is not from the main .pyx file but a file with a different
# name than the .c file (which prevents us from finding the
# .c file)
_, code = self._read_source_lines(c_file, filename)
if code is None:
return None # no source found
if self._file_path_map is None:
self._file_path_map = {}
return CythonModuleTracer(filename, py_file, c_file, self._c_files_map, self._file_path_map)
def file_reporter(self, filename):
# TODO: let coverage.py handle .py files itself
#ext = os.path.splitext(filename)[1].lower()
#if ext == '.py':
# from coverage.python import PythonFileReporter
# return PythonFileReporter(filename)
filename = canonical_filename(filename)
if self._c_files_map and filename in self._c_files_map:
c_file, rel_file_path, code = self._c_files_map[filename]
else:
c_file, _ = self._find_source_files(filename)
if not c_file:
if standalone():
raise AssertionError(filename)
return None # unknown file
rel_file_path, code = self._read_source_lines(c_file, filename)
if code is None:
if standalone():
raise AssertionError(filename)
return None # no source found
return CythonModuleReporter(c_file, filename, rel_file_path, code)
def _find_source_files(self, filename):
basename, ext = os.path.splitext(filename)
ext = ext.lower()
if ext in MODULE_FILE_EXTENSIONS:
pass
elif ext == '.pyd':
# Windows extension module
platform_suffix = re.search(r'[.]cp[0-9]+-win[_a-z0-9]*$', basename, re.I)
if platform_suffix:
basename = basename[:platform_suffix.start()]
elif ext == '.so':
# Linux/Unix/Mac extension module
platform_suffix = re.search(r'[.](?:cpython|pypy)-[0-9]+[-_a-z0-9]*$', basename, re.I)
if platform_suffix:
basename = basename[:platform_suffix.start()]
elif ext == '.pxi':
# if we get here, it means that the first traced line of a Cython module was
# not in the main module but in an include file, so try a little harder to
# find the main source file
self._find_c_source_files(os.path.dirname(filename), filename)
if filename in self._c_files_map:
return self._c_files_map[filename][0], None
if standalone():
raise AssertionError(filename)
else:
# none of our business
return None, None
c_file = filename if ext in C_FILE_EXTENSIONS else _find_c_source(basename)
if c_file is None:
# a module "pkg/mod.so" can have a source file "pkg/pkg.mod.c"
package_root = find_root_package_dir.uncached(filename)
package_path = os.path.relpath(basename, package_root).split(os.path.sep)
if len(package_path) > 1:
test_basepath = os.path.join(os.path.dirname(filename), '.'.join(package_path))
c_file = _find_c_source(test_basepath)
py_source_file = None
if c_file:
py_source_file = os.path.splitext(c_file)[0] + '.py'
if not os.path.exists(py_source_file):
py_source_file = None
try:
with OpenFile(c_file) as f:
if '/* Generated by Cython ' not in f.read(30):
return None, None # not a Cython file
except (IOError, OSError):
c_file = None
return c_file, py_source_file
def _find_c_source_files(self, dir_path, source_file):
"""
Desperately parse all C files in the directory or its package parents
(not re-descending) to find the (included) source file in one of them.
"""
if standalone():
if os.environ.get('PYTHON_COVERAGE_CYTHON_BUILD_ROOT'):
broot = os.environ['PYTHON_COVERAGE_CYTHON_BUILD_ROOT']
iter_files = lambda: (os.path.join(root, filename) for root, _, files in os.walk(broot) for filename in files)
else:
import library.python.resource
iter_files = library.python.resource.resfs_files
for c_file in iter_files():
if os.path.splitext(c_file)[1] in C_FILE_EXTENSIONS:
self._read_source_lines(c_file, source_file)
if source_file in self._c_files_map:
return
raise AssertionError((source_file, os.environ.get('PYTHON_COVERAGE_CYTHON_BUILD_ROOT')))
if not os.path.isdir(dir_path):
return
splitext = os.path.splitext
for filename in os.listdir(dir_path):
ext = splitext(filename)[1].lower()
if ext in C_FILE_EXTENSIONS:
self._read_source_lines(os.path.join(dir_path, filename), source_file)
if source_file in self._c_files_map:
return
# not found? then try one package up
if is_package_dir(dir_path):
self._find_c_source_files(os.path.dirname(dir_path), source_file)
def _read_source_lines(self, c_file, sourcefile):
"""
Parse a Cython generated C/C++ source file and find the executable lines.
Each executable line starts with a comment header that states source file
and line number, as well as the surrounding range of source code lines.
"""
if self._parsed_c_files is None:
self._parsed_c_files = {}
if c_file in self._parsed_c_files:
code_lines = self._parsed_c_files[c_file]
else:
code_lines = self._parse_cfile_lines(c_file)
self._parsed_c_files[c_file] = code_lines
if self._c_files_map is None:
self._c_files_map = {}
for filename, code in code_lines.items():
abs_path = _find_dep_file_path(c_file, filename,
relative_path_search=True)
self._c_files_map[abs_path] = (c_file, filename, code)
if sourcefile not in self._c_files_map:
return (None,) * 2 # e.g. shared library file
return self._c_files_map[sourcefile][1:]
def _parse_cfile_lines(self, c_file):
"""
Parse a C file and extract all source file lines that generated executable code.
"""
match_source_path_line = re.compile(r' */[*] +"(.*)":([0-9]+)$').match
match_current_code_line = re.compile(r' *[*] (.*) # <<<<<<+$').match
match_comment_end = re.compile(r' *[*]/$').match
match_trace_line = re.compile(r' *__Pyx_TraceLine\(([0-9]+),').match
not_executable = re.compile(
r'\s*c(?:type)?def\s+'
r'(?:(?:public|external)\s+)?'
r'(?:struct|union|enum|class)'
r'(\s+[^:]+|)\s*:'
).match
code_lines = defaultdict(dict)
executable_lines = defaultdict(set)
current_filename = None
with OpenFile(c_file) as lines:
lines = iter(lines)
for line in lines:
match = match_source_path_line(line)
if not match:
if '__Pyx_TraceLine(' in line and current_filename is not None:
trace_line = match_trace_line(line)
if trace_line:
executable_lines[current_filename].add(int(trace_line.group(1)))
continue
filename, lineno = match.groups()
current_filename = filename
lineno = int(lineno)
for comment_line in lines:
match = match_current_code_line(comment_line)
if match:
code_line = match.group(1).rstrip()
if not_executable(code_line):
break
code_lines[filename][lineno] = code_line
break
elif match_comment_end(comment_line):
# unexpected comment format - false positive?
break
# Remove lines that generated code but are not traceable.
for filename, lines in code_lines.items():
dead_lines = set(lines).difference(executable_lines.get(filename, ()))
for lineno in dead_lines:
del lines[lineno]
return code_lines
class CythonModuleTracer(FileTracer):
"""
Find the Python/Cython source file for a Cython module.
"""
def __init__(self, module_file, py_file, c_file, c_files_map, file_path_map):
super(CythonModuleTracer, self).__init__()
self.module_file = module_file
self.py_file = py_file
self.c_file = c_file
self._c_files_map = c_files_map
self._file_path_map = file_path_map
def has_dynamic_source_filename(self):
return True
def dynamic_source_filename(self, filename, frame):
"""
Determine source file path. Called by the function call tracer.
"""
source_file = frame.f_code.co_filename
try:
return self._file_path_map[source_file]
except KeyError:
pass
if standalone():
abs_path = self.module_file
else:
abs_path = _find_dep_file_path(filename, source_file)
if self.py_file and source_file[-3:].lower() == '.py':
# always let coverage.py handle this case itself
self._file_path_map[source_file] = self.py_file
return self.py_file
assert self._c_files_map is not None
if abs_path not in self._c_files_map:
self._c_files_map[abs_path] = (self.c_file, source_file, None)
self._file_path_map[source_file] = abs_path
return abs_path
class CythonModuleReporter(FileReporter):
"""
Provide detailed trace information for one source file to coverage.py.
"""
def __init__(self, c_file, source_file, rel_file_path, code):
super(CythonModuleReporter, self).__init__(source_file)
self.name = rel_file_path
self.c_file = c_file
self._code = code
self._abs_filename = self._find_abs_filename()
def lines(self):
"""
Return set of line numbers that are possibly executable.
"""
return set(self._code)
def _iter_source_tokens(self):
current_line = 1
for line_no, code_line in sorted(self._code.items()):
while line_no > current_line:
yield []
current_line += 1
yield [('txt', code_line)]
current_line += 1
def source(self):
"""
Return the source code of the file as a string.
"""
if os.path.exists(self._abs_filename):
with open_source_file(self._abs_filename) as f:
return f.read()
else:
return '\n'.join(
(tokens[0][1] if tokens else '')
for tokens in self._iter_source_tokens())
def source_token_lines(self):
"""
Iterate over the source code tokens.
"""
if os.path.exists(self._abs_filename):
with open_source_file(self._abs_filename) as f:
for line in f:
yield [('txt', line.rstrip('\n'))]
else:
for line in self._iter_source_tokens():
yield line
def _find_abs_filename(self):
for root in [
os.environ.get('PYTHON_COVERAGE_ARCADIA_SOURCE_ROOT'),
os.environ.get('PYTHON_COVERAGE_CYTHON_BUILD_ROOT'),
]:
if root:
abs_path = os.path.join(root, self.filename)
if root and os.path.exists(abs_path):
return abs_path
return self.filename
def coverage_init(reg, options):
reg.add_file_tracer(Plugin())
# ========================== Arcadia specific =================================
def standalone():
return getattr(sys, 'is_standalone_binary', False)
class OpenFile(object):
def __init__(self, filename, mode='r'):
assert 'r' in mode, ('Read-only', mode)
self.filename = filename
self.mode = mode
self.file = None
self.build_root = os.environ.get('PYTHON_COVERAGE_CYTHON_BUILD_ROOT')
def __enter__(self):
# See redefined _find_c_source() description for more info
if self.build_root:
self.file = open(os.path.join(self.build_root, self.filename), self.mode)
return self.file
elif standalone():
import library.python.resource
from six import StringIO
content = library.python.resource.resfs_read(self.filename, builtin=True)
assert content, (self.filename, os.environ.items())
return StringIO(content.decode())
else:
self.file = open(self.filename, self.mode)
return self.file
def __exit__(self, exc_type, exc_val, exc_tb):
if self.file:
self.file.close()
# ======================= Redefine some methods ===============================
if standalone():
import json
CYTHON_INCLUDE_MAP = {'undef': True}
def _find_c_source(base_path):
'''
There are two different coverage stages when c source file might be required:
* trace - python calls c_tracefunc on every line and CythonModuleTracer needs to match
pyd and pxi files with source files. This is test's runtime and tests' clean environment might
doesn't contain required sources and generated files (c, cpp), that's why we get files from resfs_src.
* report - coverage data contains only covered data and CythonModuleReporter needs to
parse source files to obtain missing lines and branches. This is test_tool's resolve/build_report step.
test_tools doesn't have compiled in sources, however, it can extract required files
from binary and set PYTHON_COVERAGE_CYTHON_BUILD_ROOT to guide coverage.
'''
if os.environ.get('PYTHON_COVERAGE_CYTHON_BUILD_ROOT'):
# Report stage (resolve)
def exists(filename):
return os.path.exists(os.path.join(os.environ['PYTHON_COVERAGE_CYTHON_BUILD_ROOT'], filename))
else:
# Trace stage (test's runtime)
def exists(filename):
import library.python.resource
return library.python.resource.resfs_src(filename, resfs_file=True)
if os.environ.get('PYTHON_COVERAGE_CYTHON_INCLUDE_MAP'):
if CYTHON_INCLUDE_MAP.get('undef'):
with open(os.environ['PYTHON_COVERAGE_CYTHON_INCLUDE_MAP']) as afile:
data = json.load(afile)
data = {os.path.splitext(k)[0]: v for k, v in data.items()}
CYTHON_INCLUDE_MAP.clear()
CYTHON_INCLUDE_MAP.update(data)
if base_path in CYTHON_INCLUDE_MAP:
# target file was included and should be sought inside another pyx file
base_path = CYTHON_INCLUDE_MAP[base_path]
for suffix in ['.pyx.c', '.pyx.cpp'] + C_FILE_EXTENSIONS:
if exists(base_path + suffix):
return base_path + suffix
return None
def _find_dep_file_path(main_file, file_path, relative_path_search=False):
# file_path is already arcadia root relative
return canonical_filename(file_path)
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