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from __future__ import division
from functools import partial
import numpy as np
import pytest
from pandas.compat import lzip
from pandas.core.dtypes.common import is_categorical_dtype
from pandas.core.dtypes.dtypes import IntervalDtype
from pandas import (
Categorical, CategoricalIndex, Float64Index, Index, Int64Index, Interval,
IntervalIndex, date_range, notna, period_range, timedelta_range)
from pandas.core.arrays import IntervalArray
import pandas.core.common as com
import pandas.util.testing as tm
@pytest.fixture(params=[None, 'foo'])
def name(request):
return request.param
class Base(object):
"""
Common tests for all variations of IntervalIndex construction. Input data
to be supplied in breaks format, then converted by the subclass method
get_kwargs_from_breaks to the expected format.
"""
@pytest.mark.parametrize('breaks', [
[3, 14, 15, 92, 653],
np.arange(10, dtype='int64'),
Int64Index(range(-10, 11)),
Float64Index(np.arange(20, 30, 0.5)),
date_range('20180101', periods=10),
date_range('20180101', periods=10, tz='US/Eastern'),
timedelta_range('1 day', periods=10)])
def test_constructor(self, constructor, breaks, closed, name):
result_kwargs = self.get_kwargs_from_breaks(breaks, closed)
result = constructor(closed=closed, name=name, **result_kwargs)
assert result.closed == closed
assert result.name == name
assert result.dtype.subtype == getattr(breaks, 'dtype', 'int64')
tm.assert_index_equal(result.left, Index(breaks[:-1]))
tm.assert_index_equal(result.right, Index(breaks[1:]))
@pytest.mark.parametrize('breaks, subtype', [
(Int64Index([0, 1, 2, 3, 4]), 'float64'),
(Int64Index([0, 1, 2, 3, 4]), 'datetime64[ns]'),
(Int64Index([0, 1, 2, 3, 4]), 'timedelta64[ns]'),
(Float64Index([0, 1, 2, 3, 4]), 'int64'),
(date_range('2017-01-01', periods=5), 'int64'),
(timedelta_range('1 day', periods=5), 'int64')])
def test_constructor_dtype(self, constructor, breaks, subtype):
# GH 19262: conversion via dtype parameter
expected_kwargs = self.get_kwargs_from_breaks(breaks.astype(subtype))
expected = constructor(**expected_kwargs)
result_kwargs = self.get_kwargs_from_breaks(breaks)
iv_dtype = IntervalDtype(subtype)
for dtype in (iv_dtype, str(iv_dtype)):
result = constructor(dtype=dtype, **result_kwargs)
tm.assert_index_equal(result, expected)
@pytest.mark.parametrize('breaks', [
[np.nan] * 2, [np.nan] * 4, [np.nan] * 50])
def test_constructor_nan(self, constructor, breaks, closed):
# GH 18421
result_kwargs = self.get_kwargs_from_breaks(breaks)
result = constructor(closed=closed, **result_kwargs)
expected_subtype = np.float64
expected_values = np.array(breaks[:-1], dtype=object)
assert result.closed == closed
assert result.dtype.subtype == expected_subtype
tm.assert_numpy_array_equal(result._ndarray_values, expected_values)
@pytest.mark.parametrize('breaks', [
[],
np.array([], dtype='int64'),
np.array([], dtype='float64'),
np.array([], dtype='datetime64[ns]'),
np.array([], dtype='timedelta64[ns]')])
def test_constructor_empty(self, constructor, breaks, closed):
# GH 18421
result_kwargs = self.get_kwargs_from_breaks(breaks)
result = constructor(closed=closed, **result_kwargs)
expected_values = np.array([], dtype=object)
expected_subtype = getattr(breaks, 'dtype', np.int64)
assert result.empty
assert result.closed == closed
assert result.dtype.subtype == expected_subtype
tm.assert_numpy_array_equal(result._ndarray_values, expected_values)
@pytest.mark.parametrize('breaks', [
tuple('0123456789'),
list('abcdefghij'),
np.array(list('abcdefghij'), dtype=object),
np.array(list('abcdefghij'), dtype='<U1')])
def test_constructor_string(self, constructor, breaks):
# GH 19016
msg = ('category, object, and string subtypes are not supported '
'for IntervalIndex')
with pytest.raises(TypeError, match=msg):
constructor(**self.get_kwargs_from_breaks(breaks))
@pytest.mark.parametrize('cat_constructor', [
Categorical, CategoricalIndex])
def test_constructor_categorical_valid(self, constructor, cat_constructor):
# GH 21243/21253
if isinstance(constructor, partial) and constructor.func is Index:
# Index is defined to create CategoricalIndex from categorical data
pytest.skip()
breaks = np.arange(10, dtype='int64')
expected = IntervalIndex.from_breaks(breaks)
cat_breaks = cat_constructor(breaks)
result_kwargs = self.get_kwargs_from_breaks(cat_breaks)
result = constructor(**result_kwargs)
tm.assert_index_equal(result, expected)
def test_generic_errors(self, constructor):
# filler input data to be used when supplying invalid kwargs
filler = self.get_kwargs_from_breaks(range(10))
# invalid closed
msg = "invalid option for 'closed': invalid"
with pytest.raises(ValueError, match=msg):
constructor(closed='invalid', **filler)
# unsupported dtype
msg = 'dtype must be an IntervalDtype, got int64'
with pytest.raises(TypeError, match=msg):
constructor(dtype='int64', **filler)
# invalid dtype
msg = "data type 'invalid' not understood"
with pytest.raises(TypeError, match=msg):
constructor(dtype='invalid', **filler)
# no point in nesting periods in an IntervalIndex
periods = period_range('2000-01-01', periods=10)
periods_kwargs = self.get_kwargs_from_breaks(periods)
msg = 'Period dtypes are not supported, use a PeriodIndex instead'
with pytest.raises(ValueError, match=msg):
constructor(**periods_kwargs)
# decreasing values
decreasing_kwargs = self.get_kwargs_from_breaks(range(10, -1, -1))
msg = 'left side of interval must be <= right side'
with pytest.raises(ValueError, match=msg):
constructor(**decreasing_kwargs)
class TestFromArrays(Base):
"""Tests specific to IntervalIndex.from_arrays"""
@pytest.fixture
def constructor(self):
return IntervalIndex.from_arrays
def get_kwargs_from_breaks(self, breaks, closed='right'):
"""
converts intervals in breaks format to a dictionary of kwargs to
specific to the format expected by IntervalIndex.from_arrays
"""
return {'left': breaks[:-1], 'right': breaks[1:]}
def test_constructor_errors(self):
# GH 19016: categorical data
data = Categorical(list('01234abcde'), ordered=True)
msg = ('category, object, and string subtypes are not supported '
'for IntervalIndex')
with pytest.raises(TypeError, match=msg):
IntervalIndex.from_arrays(data[:-1], data[1:])
# unequal length
left = [0, 1, 2]
right = [2, 3]
msg = 'left and right must have the same length'
with pytest.raises(ValueError, match=msg):
IntervalIndex.from_arrays(left, right)
@pytest.mark.parametrize('left_subtype, right_subtype', [
(np.int64, np.float64), (np.float64, np.int64)])
def test_mixed_float_int(self, left_subtype, right_subtype):
"""mixed int/float left/right results in float for both sides"""
left = np.arange(9, dtype=left_subtype)
right = np.arange(1, 10, dtype=right_subtype)
result = IntervalIndex.from_arrays(left, right)
expected_left = Float64Index(left)
expected_right = Float64Index(right)
expected_subtype = np.float64
tm.assert_index_equal(result.left, expected_left)
tm.assert_index_equal(result.right, expected_right)
assert result.dtype.subtype == expected_subtype
class TestFromBreaks(Base):
"""Tests specific to IntervalIndex.from_breaks"""
@pytest.fixture
def constructor(self):
return IntervalIndex.from_breaks
def get_kwargs_from_breaks(self, breaks, closed='right'):
"""
converts intervals in breaks format to a dictionary of kwargs to
specific to the format expected by IntervalIndex.from_breaks
"""
return {'breaks': breaks}
def test_constructor_errors(self):
# GH 19016: categorical data
data = Categorical(list('01234abcde'), ordered=True)
msg = ('category, object, and string subtypes are not supported '
'for IntervalIndex')
with pytest.raises(TypeError, match=msg):
IntervalIndex.from_breaks(data)
def test_length_one(self):
"""breaks of length one produce an empty IntervalIndex"""
breaks = [0]
result = IntervalIndex.from_breaks(breaks)
expected = IntervalIndex.from_breaks([])
tm.assert_index_equal(result, expected)
class TestFromTuples(Base):
"""Tests specific to IntervalIndex.from_tuples"""
@pytest.fixture
def constructor(self):
return IntervalIndex.from_tuples
def get_kwargs_from_breaks(self, breaks, closed='right'):
"""
converts intervals in breaks format to a dictionary of kwargs to
specific to the format expected by IntervalIndex.from_tuples
"""
if len(breaks) == 0:
return {'data': breaks}
tuples = lzip(breaks[:-1], breaks[1:])
if isinstance(breaks, (list, tuple)):
return {'data': tuples}
elif is_categorical_dtype(breaks):
return {'data': breaks._constructor(tuples)}
return {'data': com.asarray_tuplesafe(tuples)}
def test_constructor_errors(self):
# non-tuple
tuples = [(0, 1), 2, (3, 4)]
msg = 'IntervalIndex.from_tuples received an invalid item, 2'
with pytest.raises(TypeError, match=msg.format(t=tuples)):
IntervalIndex.from_tuples(tuples)
# too few/many items
tuples = [(0, 1), (2,), (3, 4)]
msg = 'IntervalIndex.from_tuples requires tuples of length 2, got {t}'
with pytest.raises(ValueError, match=msg.format(t=tuples)):
IntervalIndex.from_tuples(tuples)
tuples = [(0, 1), (2, 3, 4), (5, 6)]
with pytest.raises(ValueError, match=msg.format(t=tuples)):
IntervalIndex.from_tuples(tuples)
def test_na_tuples(self):
# tuple (NA, NA) evaluates the same as NA as an elemenent
na_tuple = [(0, 1), (np.nan, np.nan), (2, 3)]
idx_na_tuple = IntervalIndex.from_tuples(na_tuple)
idx_na_element = IntervalIndex.from_tuples([(0, 1), np.nan, (2, 3)])
tm.assert_index_equal(idx_na_tuple, idx_na_element)
class TestClassConstructors(Base):
"""Tests specific to the IntervalIndex/Index constructors"""
@pytest.fixture(params=[IntervalIndex, partial(Index, dtype='interval')],
ids=['IntervalIndex', 'Index'])
def constructor(self, request):
return request.param
def get_kwargs_from_breaks(self, breaks, closed='right'):
"""
converts intervals in breaks format to a dictionary of kwargs to
specific to the format expected by the IntervalIndex/Index constructors
"""
if len(breaks) == 0:
return {'data': breaks}
ivs = [Interval(l, r, closed) if notna(l) else l
for l, r in zip(breaks[:-1], breaks[1:])]
if isinstance(breaks, list):
return {'data': ivs}
elif is_categorical_dtype(breaks):
return {'data': breaks._constructor(ivs)}
return {'data': np.array(ivs, dtype=object)}
def test_generic_errors(self, constructor):
"""
override the base class implementation since errors are handled
differently; checks unnecessary since caught at the Interval level
"""
pass
def test_constructor_errors(self, constructor):
# mismatched closed within intervals with no constructor override
ivs = [Interval(0, 1, closed='right'), Interval(2, 3, closed='left')]
msg = 'intervals must all be closed on the same side'
with pytest.raises(ValueError, match=msg):
constructor(ivs)
# scalar
msg = (r'IntervalIndex\(...\) must be called with a collection of '
'some kind, 5 was passed')
with pytest.raises(TypeError, match=msg):
constructor(5)
# not an interval
msg = ("type <(class|type) 'numpy.int64'> with value 0 "
"is not an interval")
with pytest.raises(TypeError, match=msg):
constructor([0, 1])
@pytest.mark.parametrize('data, closed', [
([], 'both'),
([np.nan, np.nan], 'neither'),
([Interval(0, 3, closed='neither'),
Interval(2, 5, closed='neither')], 'left'),
([Interval(0, 3, closed='left'),
Interval(2, 5, closed='right')], 'neither'),
(IntervalIndex.from_breaks(range(5), closed='both'), 'right')])
def test_override_inferred_closed(self, constructor, data, closed):
# GH 19370
if isinstance(data, IntervalIndex):
tuples = data.to_tuples()
else:
tuples = [(iv.left, iv.right) if notna(iv) else iv for iv in data]
expected = IntervalIndex.from_tuples(tuples, closed=closed)
result = constructor(data, closed=closed)
tm.assert_index_equal(result, expected)
@pytest.mark.parametrize('values_constructor', [
list, np.array, IntervalIndex, IntervalArray])
def test_index_object_dtype(self, values_constructor):
# Index(intervals, dtype=object) is an Index (not an IntervalIndex)
intervals = [Interval(0, 1), Interval(1, 2), Interval(2, 3)]
values = values_constructor(intervals)
result = Index(values, dtype=object)
assert type(result) is Index
tm.assert_numpy_array_equal(result.values, np.array(values))
class TestFromIntervals(TestClassConstructors):
"""
Tests for IntervalIndex.from_intervals, which is deprecated in favor of the
IntervalIndex constructor. Same tests as the IntervalIndex constructor,
plus deprecation test. Should only need to delete this class when removed.
"""
@pytest.fixture
def constructor(self):
def from_intervals_ignore_warnings(*args, **kwargs):
with tm.assert_produces_warning(FutureWarning,
check_stacklevel=False):
return IntervalIndex.from_intervals(*args, **kwargs)
return from_intervals_ignore_warnings
def test_deprecated(self):
ivs = [Interval(0, 1), Interval(1, 2)]
with tm.assert_produces_warning(FutureWarning, check_stacklevel=False):
IntervalIndex.from_intervals(ivs)
@pytest.mark.skip(reason='parent class test that is not applicable')
def test_index_object_dtype(self):
pass
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